As our Senior Data Engineer, you'll own AQEMIA's data platform end to end — from ingestion through the pipeline to the trusted, model-ready datasets that power science, ML and analytics. What makes this role distinctive is the data itself: chemical structures, molecular conformations, physics- and ML-based predictions, and experimental results from CROs and partners.
A core part of the work is modelling these scientific entities well — establishing canonical identity, provenance and trustworthy lineage across heterogeneous, often messy sources — so scientists, and increasingly AI agents, can rely on them. You'll work at the intersection of software engineering, data infrastructure and scientific research, with real scope to shape architecture rather than just execute against it.
As AQEMIA moves toward more service and API-driven integration next year, you'll help make data fit for automation — expanding your impact from pipelines to the systems that consume them.

AQEMIA is a drug invention company dedicated to novel medicines — never me-toos — tackling major diseases such as oncology. Our physics-based, generative AI platform invents drug candidates beyond the reach of traditional R&D, without dependence on experimental data.
We are building a rapidly expanding portfolio of proprietary programs, alongside collaborations with top pharmaceutical companies. Multiple discovery successes are already achieved, with lead programs progressing through in vivo optimization.
AQEMIA is part of the French Tech 120 program, which supports the most promising scale-ups in France with global impact potential.
AQEMIA is member of the BioIndustry Association (BIA) and the Knowledge Quarter in London.
AQEMIA is based in Paris (HQ) and London.
We are growing and hiring! Discover our opportunities here: https://jobs.lever.co/aqemia.com
Discover the roles and behind-the-scenes at AQEMIA: https://www.welcometothejungle.com/fr/companies/aqemia