Alexion Pharmaceuticals, Inc.

Senior Automation Engineer — Orchestration & Material Management

Alexion Pharmaceuticals, Inc.  •  New Haven, CT (Onsite)  •  2 hours ago
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Job Description

Be a key member of the Advanced Robotics & Data Orchestration Team within Alexion’s Product Development & Clinical Supply organization. You will own the physical execution layer that moves materials through automated product development labs. You will design and operationalize material flows — inventory capture, kitting, staging, pick and place, and chain of custody — while implementing run-control logic that makes robots and instruments work as one. This role is hardware-leaning and operations-facing:you willspend meaningful time at the bench commissioning work cells,validatingmaterial movement and ID capture, and partnering with mechatronicsengineersand operators to deliver reliable, auditable execution. Help us accelerate life-changing therapies to patients with rare and ultra-rare diseases.

This is what you will do:

  • Translate laboratory material-flow requirements (lots, expiry, storage, kitting, staging, environmental constraints) into orchestrated workflows and handling patterns.

  • Implement run-control logic for material handling (state models/events), exception handling, and safe recovery/rollback; contribute modules/drivers aligned to interface contracts.

  • Build material-management capabilities: barcode/RFID capture, inventory updates, weigh/dispensereconciliation, queue/station logic, and end-of-run reconciliation.

  • Integrate robots/instruments with schedulers and data services to synchronize physical moves with recipes, sampling, and analytics.

  • Configure interfaces and schemas with Data Engineering for material lineage, sample IDs, and chain-of-custody metadata;validateend-to-end traceability.

  • Apply configuration-as-code, CI/CD, and automated tests; publish releases and operator-facing migration guides.

  • Embed telemetry/logs/alerts; contribute to service levelobjectivesfocused on flow reliability, pick/place accuracy, and inventory correctness.

  • Commission and support priority workflows (cutovers/hypercare), track reuse, commissioning time, error/rerun reduction, uptime, and material-flow KPIs.

You willbe responsible for

  • Reusable orchestration modules and material-handling patterns that meet reliability and usability targets.

  • Audit-ready trails for setpoints, states, recipe steps, material movements, and chain of custody.

  • Clear documentation, release notes, and onboarding kits that enable repeatable adoption.

  • Continuous improvement of laboratory material-flow reliability using telemetry and corrective actions.

You will need to have:

  • Education/experience: PhD + 0 years, or MS + 4 years, or BS + 8 years in Mechanical, Electrical, Chemical, Mechatronics, or related engineering (or equivalent experience)—including4+years in laboratory or industrial automation focused on material handling, robotics/instrument integration, or work cell operations.

  • Hands-on experience with pick/place design, barcode/RFID capture, weigh/dispense, inventory systems, and exception/recovery patterns in automated labs.

  • Familiarity with schemas/data contracts for lineage and inventory; basic SQL or Python for validation and reconciliation.

  • Strong collaboration with mechatronics/controls, operators, and data engineers; clear, operator-first documentation.

  • The duties of this role may require periodic work in a laboratory or manufacturing environment. As is typical of such roles, employees must be able, with or without an accommodation to: lift/carry 15/30 pounds unassisted/assisted; work comfortably in a controlled environment with and around hazardous materials; gown/degownPPE; use a computer; engage in communications via phone, video, and electronic messaging; engage in problem solving and non-linear thought, analysis, and dialogue; collaborate with others; maintain general availability during standard business hours.

We wouldpreferfor you to have:

  • Exposure to ELN/LIMS/SDMS integrations, chain of custody/data integrity, and regulated laboratory practices.

  • Hands onwork with robotics,vision-basedverification, barcode/RFID, weigh/dispense, or AS/RS systems for materials.

  • Familiarity with observability tooling (metrics/logs/alerts), reliability engineering concepts (SLIs/SLOs), and structuredpostmortems

In person working statement

When we put unexpected teams in the same room, we unleash bold thinking with the power to inspirelifechangingmedicines.Inpersonworking gives us the platform we need to connect, work at pace, and challengeperceptionsThat iswhy we work, on average, a minimum of four days per week from the office. We balancethis expectation while respecting individual flexibility. Join us in our unique and ambitious world.

Date Posted

22-jun-2026

Closing Date

05-jul-2026

Our mission is to build an inclusive environment where equal employment opportunities are available to all applicants and employees. In furtherance of that mission, we welcome and consider applications from all qualified candidates, regardless of their protected characteristics. If you have a disability or special need that requires accommodation, please complete the corresponding section in the application form.

Alexion Pharmaceuticals, Inc.

About Alexion Pharmaceuticals, Inc.

Alexion, AstraZeneca Rare Disease is focused on pioneering new possibilities for the rare disease community. We are driven by a mission to change what it means to live with a rare disease.

A leader in rare disease for more than three decades and today continues to build a diversified pipeline across disease areas with significant unmet need, using an array of innovative modalities.

As part of AstraZeneca, Alexion is continually expanding its global geographic footprint to serve more rare disease patients around the world. It is headquartered in Boston, US.

Alexion’s pioneering legacy in rare disease is rooted in being the first to translate the complex biology of the complement system into novel medicines. Alexion pushes boundaries to accelerate discovery of life-changing medicines. Headquartered in Boston, Massachusetts, Alexion has offices around the world and continues to expand its reach to benefit more people globally.

GL/NP/0116

GL/NP/0095

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Industry
Biotech & Life Sciences
Company Size
5,001-10,000 employees
Headquarters
Boston, Massachusetts
Year Founded
1992
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